DROP - Detection of RNA Outliers Pipeline

DROP is intended to help researchers use RNA-Seq data in order to detect genes with aberrant expression, aberrant splicing and mono-allelic expression. It consists of three independent modules for each of those strategies. After installing DROP, the user needs to fill in the config file and sample annotation table (Preparing Input Data). Then, the DROP can be executed in multiple ways (Executing the Pipeline).

Quickstart

Install via pip

pip install drop

Initialise the project

cd <project_directory> drop init

Indices and tables